Scaffold has proven its performance in over 250 academic, public and private research facilities around the world with the ability to display a visual comparison of the proteins found by multiple search engines across all the samples of an experiment.

• Visualize >> compare multiple samples and categories with advanced statistical analysis.


• Validate >> Identify proteins by validating MS/MS data from multiple search engines.


• Collaborate >> Organize and share MS/MS experimental data with clients or colleagues.
  

  >> MassQC in the Press!

Are your LC-MS/MS experiments reproducible? Proteome Software released its new online LC-MS/MS Quality Control tool, MassQC, an online Quality Control tool that helps you achieve more reproducible LC-MS/MS experiments. Monitor and troubleshoot the performance of your LC-MS/MS instrumentation with the web-based quality control tool. For a 30-day free trial, visit our subscribe page.

MassQC Webinar Info > Email for more info...

Current news: See the Scaffold 3.0 press release!

In Other news: See the MassQC press release!

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MassQC improves reproducibility by examining repeated, standard runs for a small number of known proteins, and covers both width and breadth of your LC-MS system performance. Monitor and troubleshoot you LC-MS/MSinstrumentation. Evaluate MassQC today at www.massqc.com.

Try the quantitation module for Scaffold!

"By presenting reporter ions visually, Scaffold Q+ software allows scientists to more easily comprehend the complex data presented in multiple iTRAQ and TMT experiments."