Leading edge analytics for mass spectrometry
Welcome to the Scaffold Software™ community
We offer DDA and DIA proteomics and small molecule mass spectrometry software solutions for handling large-scale, data-rich, biological identification and quantitative experiments.
We [use] Scaffold to assemble Sequest, Mascot, and GPM results ... of human plasma ... Scaffold has really been useful to pool search results and discriminate between false and true positives.
Pierre Gagne, CHUL Research Center
Core Facilities
Managing a core facility or shared resource department? Need help with gaps in your software pipeline? Want to try new methods like DIA proteomics? Do you need an easy way to share results with your customers?
Researchers
Need an elegant yet easy to use solution for data processing? Not sure where to begin when starting up a new lab. Let us help take the pressure off setting up a software pipeline so you can focus on the science.