Leading edge analytics for mass spectrometry

Welcome to the Scaffold Software community

We offer DDA and DIA proteomics and small molecule mass spectrometry software solutions for handling large-scale, data-rich, biological identification and quantitative experiments.


I have to say that [Scaffold] is the best software package I have ever used. Finally, I can get rid of all the excel spreadsheets and look at a nice overview of my data.

Manuel Mayr, University of London